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dendrogram of xba i-pfge profiles  (Applied Maths)

 
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    Applied Maths dendrogram of xba i-pfge profiles
    Dendrogram Of Xba I Pfge Profiles, supplied by Applied Maths, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Average 90 stars, based on 1 article reviews
    dendrogram of xba i-pfge profiles - by Bioz Stars, 2026-05
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    Dendrogram of the PFGE- SmaI and PFGE- ApaI profiles of MRSA isolated from insulin-dependent diabetic individuals generated by Dice analysis/UPGMA (BioNumerics, Applied Maths) and their molecular characterization by SCC mec typing and MLST. a. Isolates showing > 80% similarity ( clusters A and B) after digestion with SmaI . b. Band pattern of strain 735 N obtained by digestion with ApaI . N, nasal mucosa; O, oropharyngeal mucosa; S, susceptible; R, resistant. * International clones used as controls

    Journal: Annals of Clinical Microbiology and Antimicrobials

    Article Title: Molecular characterization of methicillin-resistant Staphylococcus aureus among insulin-dependent diabetic individuals in Brazil

    doi: 10.1186/s12941-020-00401-y

    Figure Lengend Snippet: Dendrogram of the PFGE- SmaI and PFGE- ApaI profiles of MRSA isolated from insulin-dependent diabetic individuals generated by Dice analysis/UPGMA (BioNumerics, Applied Maths) and their molecular characterization by SCC mec typing and MLST. a. Isolates showing > 80% similarity ( clusters A and B) after digestion with SmaI . b. Band pattern of strain 735 N obtained by digestion with ApaI . N, nasal mucosa; O, oropharyngeal mucosa; S, susceptible; R, resistant. * International clones used as controls

    Article Snippet: Fig. 3 Dendrogram of the PFGE- ApaI profiles of MSSA isolates generated by Dice analysis/UPGMA (BioNumerics, Applied Maths) and sequence types obtained by MLST.

    Techniques: Isolation, Generated, Clone Assay

    Dendrogram of the PFGE- ApaI profiles of MSSA isolates generated by Dice analysis/UPGMA (BioNumerics, Applied Maths) and sequence types obtained by MLST. Clustering of isolates digested with ApaI that were analyzed by MLST. All isolates except for 735 N were susceptible to methicillin (MSSA). N, nasal mucosa; O, oropharyngeal mucosa; arc C, carbamate kinase; aro E, shikimate dehydrogenase; glp F, glycerol kinase; gmk , guanylate kinase; pta , phosphate acetyltransferase; tpi , triosephosphate isomerase; yqi L, acetyl coenzyme A; ST, sequence type. Isolate 76 N was identified as ST398 in a previous study from our group. Isolate 700O was sent to the curator of the MLST database ( https://pubmlst.org/ ) for identification of the new ST. This isolate was identified as ST 6133

    Journal: Annals of Clinical Microbiology and Antimicrobials

    Article Title: Molecular characterization of methicillin-resistant Staphylococcus aureus among insulin-dependent diabetic individuals in Brazil

    doi: 10.1186/s12941-020-00401-y

    Figure Lengend Snippet: Dendrogram of the PFGE- ApaI profiles of MSSA isolates generated by Dice analysis/UPGMA (BioNumerics, Applied Maths) and sequence types obtained by MLST. Clustering of isolates digested with ApaI that were analyzed by MLST. All isolates except for 735 N were susceptible to methicillin (MSSA). N, nasal mucosa; O, oropharyngeal mucosa; arc C, carbamate kinase; aro E, shikimate dehydrogenase; glp F, glycerol kinase; gmk , guanylate kinase; pta , phosphate acetyltransferase; tpi , triosephosphate isomerase; yqi L, acetyl coenzyme A; ST, sequence type. Isolate 76 N was identified as ST398 in a previous study from our group. Isolate 700O was sent to the curator of the MLST database ( https://pubmlst.org/ ) for identification of the new ST. This isolate was identified as ST 6133

    Article Snippet: Fig. 3 Dendrogram of the PFGE- ApaI profiles of MSSA isolates generated by Dice analysis/UPGMA (BioNumerics, Applied Maths) and sequence types obtained by MLST.

    Techniques: Generated, Sequencing

    Xbal pulsed-field gel electrophoresis–based dendrogram for 85 ST131 Escherichia coli isolates from veterans. The 85 isolates were selected randomly from the total ST131 population. Region denotes the 4 main US census regions. Horizontal lines bound the 5 most prevalent pulsotypes. Vertical line separates isolates with ≥98% overall profile similarity from less similar isolates. Abbreviations: ESBL, extended-spectrum β-lactamase; FQ, fluoroquinolone phenotype (R, resistant; S, susceptible); PFGE, pulsed-field gel electrophoresis.

    Journal: Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America

    Article Title: Escherichia coli Sequence Type 131 (ST131) Subclone H 30 as an Emergent Multidrug-Resistant Pathogen Among US Veterans

    doi: 10.1093/cid/cit503

    Figure Lengend Snippet: Xbal pulsed-field gel electrophoresis–based dendrogram for 85 ST131 Escherichia coli isolates from veterans. The 85 isolates were selected randomly from the total ST131 population. Region denotes the 4 main US census regions. Horizontal lines bound the 5 most prevalent pulsotypes. Vertical line separates isolates with ≥98% overall profile similarity from less similar isolates. Abbreviations: ESBL, extended-spectrum β-lactamase; FQ, fluoroquinolone phenotype (R, resistant; S, susceptible); PFGE, pulsed-field gel electrophoresis.

    Article Snippet: A PFGE dendrogram was inferred within BioNumerics, version 6.6 (Applied Maths, Austin, Texas) according to the unweighted pair group method based on Dice coefficients [ 16 ].

    Techniques: Pulsed-Field Gel, Electrophoresis